Recent Posts

• October 28, 2021

  Two collaborative projects awarded

  The NCMM recently published a call for the funding of collaborative projects between NCMM Associate Investigators and NCMM groups. We are happy to announce that we received funding for two projects. We will be collaborating with June Myklebust, Nils Halberg, and Kalle Malmberg to explore spatial tumor biology, combining transcriptomics and proteomics data at the single cell level. This is an extension of our...

• October 22, 2021

  Postdoctoral position available

  We have an open position for a 3-year postdoctoral fellowship to work in computational method development with applications to cancer. Please check the open positions page for more information.

• October 05, 2021

  Visiting PhD student

  This week the group is joined by PhD student Sina Thorsen Takle from Nils Halberg's group, University of Bergen. Sina is visiting us in Oslo to get her hands on network analysis approaches and apply these to Imaging Mass Cytometry data. This is part of a recently funded project by the NCMM Collaborative Grants to the Halberg, Malmberg, and Kuijjer groups. Welcome Sina!

• September 28, 2021

  New BioRxiv pre-print

  We have a new BioRχiv pre-print in which we describe how to apply our LIONESS method to different network reconstruction algorithms and data types. In the pre-print, we highlight how decisions related to data preprocessing may affect the output networks, discuss some of the properties specific to networks modeled with LIONESS, and give examples of how to perform downstream analysis on LIONESS networks. The BioRχiv pre-print can be found...

• September 20, 2021

  New network tools

  We updated the website's tools section to include new methods developed by the group that will be released soon, including PORCUPINE and retriever.